Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015891923.1_cds_XP_016446832.1_41651
CDS Infomation

[gene=LOC107771885] [db_xref=GeneID:107771885] [protein=subtilisin-like protease SBT3.9] [protein_id=XP_016446832.1] [location=join(1594..1674,1818..1915,2026..2123,2247..2405,3011..3122,3198..3726,3803..3897,3998..4240,4319..4433,4688..4877,4975..5537)] [gbkey=CDS]
Sequence

ATGGGTGTTTCAGAAAAGACTCTTCTTTTACTGTTTCTTTGTGTTTTTCTTGGAGATATT
AGCCTCTGCTTTTCTTCCAAGTTATATGTGGTGTACATGGGAAGCAAAGATGGTGATGAA
CACCCAGATGAAATTTTGAGGCAAAACCATCAAATGCTGACTGCTATTCATAAAGGAAGT
GTTGAACAGGCCAAGACTTCTCATGTATATAGTTATAGGCATGGTTTTAAAGGCTTTGCA
GCCAAGTTGACTGAGGCACAGGCTTCTGAAATATCCAAAATGCCTGGAGTGGTATCTGTA
TTTCCAAATACTAAGAGGAGCCTACACACAACACATTCATGGGATTTTATGGGGCTCAGT
GATGATGAAACAATGGAAATCCCAGGTTTTTCTACCAAGAACCAAGTTAATGTTATCATT
GGTTTCATTGATACAGGAATTTGGCCTGAGTCTCCAAGTTTTAGTGATACCAACATGCCT
CCAGTGCCAGCTGGATGGAAAGGACAGTGCCAATCAGGGGAAGCATTCAATGCCTCTATA
TGCAACAGGAAAATAATTGGGGCTAAATATTATATGAGCGGCTATGAAGCTGAAGAAGAA
AATGGGAAGACCATGTTATACAAGTCTGCTAGGGACAGTTCTGGTCATGGGAGTCACACA
GCTTCTACAGCAGCGGGACGTTACATAGCTAATATGAATTACAAAGGTTTGGCAAATGGA
GGAGCCAGAGGTGGTGCCCCAATGGCCAGGATAGCAGTGTACAAAACCTGCTGGAGTTCT
GGTTGCTATGATGTTGATTTATTGGCTGCATTTGATGATGCAATTAGAGATGGGGTTCAT
GTCATTTCTCTATCTTTGGGCCCTGATGCTCCCCAAGGAGATTATTTCAATGATGCCATT
TCTGTGGGGTCATTTCATGCTGTTAGCCGCGGAATACTTGTGGTCGCTTCAGTTGGAAAT
GAAGGCAGCACTGGTTCAGCCACAAATTTAGCTCCTTGGGTGATCACAGTTGCAGCCAGT
TCAACCGACAGAGATTTTACTTCTGATATTGTACTAGGAAATGGAGTTCGACTCAAGGGT
GAAAGTCTTAGCTTATCACAAATGAATACATCTACAAGAATTATACCTGCTTCTGAAGCT
TATGCTGGATACTTCACTCCCTATCAATCCAGTTATTGCTTAGATAGTTCTTTGAATAGA
ACTAAGGCCAAAGGGAAGGTTCTTGTGTGCCTACATGCTGGAAGCTCAAGTGAGTCAAAG
ATGGAGAAAAGCATTATAGTTAAAGAAGCCGGTGGAGTTGGGATGATCCTTATAGATGAA
GCAGACAAGGGTGTGGCCATCCCTTTTGTCATTCCTGCAGCAACTGTTGGGAAAAGGATT
GGAAACAAGATCCTAGCTTACATTAATAATACACGCCTCCCCATGGCAAGGATTCTCTCT
GCTAAAACCGTTTTGGGAGCTCAACCTGCTCCTCGGGTAGCAGCATTTTCTTCTAGAGGT
CCTAATTCTCTAACACCAGAAATTTTGAAGCCTGATATTGCAGCTCCTGGATTAAATATC
CTGGCAGCATGGTCTCCAGCAGCTTCTACTAAGTTGAACTTCAACATACTCTCCGGAACT
TCTATGGCTTGCCCCCACATAACAGGAGTCGTTGCCTTGTTAAAAGCTGTGCATCCATCT
TGGTCTCCCTCTGCAATTAAATCCGCGATCATGACAACAGCTAAACTGTCAGATAAGCAT
CACAAACCCATAATAGTGGATCCTGAAGGGAAGAGGGCTAATCCATTTGACTTTGGTTCT
GGCTTTGTTAACCCCATAAAAGTCCTGGATCCTGGTCTTATATACGATGCACAACCAGCA
GATTACAAAGCATTTCTTTGTTCAATTGGTTATGATGAGAAATCTCTGCATCTGATTACA
AGGGACAACAGCACCTGTGATCAAACCTTTGCGTCACCAAATGGACTAAATTATCCCTCC
ATCACAGTACCAAACCTAAGAAGCACATATTCAGTAACTCGAACTGTTACTAACGTGGGA
AAAGCAAGAAGCATTTACAAGGCAGTCGTCTTTGCCCCAATGGGTGTCAATGTCACTGTG
GTTCCCCGAAGATTAGCCTTCACTAAATATTACCAGAAGATGAATTTTACAGTGAACTTC
AAGGTGGCTGCACCAACAGAGGGATATGTGTTTGGTTCTTTGACATGGAGGAACAAAAGA
ACATGGGTAACATCTCCACTTGTCGTCAGAGTGGCACATTCCAACATGGGTATGATGGTA
TAG

Peptide Sequence

PEP ID

XP_016446832.1
PEP Infomation

PREDICTED: subtilisin-like protease SBT3.9 [Nicotiana tabacum]
Sequence

MGVSEKTLLLLFLCVFLGDISLCFSSKLYVVYMGSKDGDEHPDEILRQNHQMLTAIHKGS
VEQAKTSHVYSYRHGFKGFAAKLTEAQASEISKMPGVVSVFPNTKRSLHTTHSWDFMGLS
DDETMEIPGFSTKNQVNVIIGFIDTGIWPESPSFSDTNMPPVPAGWKGQCQSGEAFNASI
CNRKIIGAKYYMSGYEAEEENGKTMLYKSARDSSGHGSHTASTAAGRYIANMNYKGLANG
GARGGAPMARIAVYKTCWSSGCYDVDLLAAFDDAIRDGVHVISLSLGPDAPQGDYFNDAI
SVGSFHAVSRGILVVASVGNEGSTGSATNLAPWVITVAASSTDRDFTSDIVLGNGVRLKG
ESLSLSQMNTSTRIIPASEAYAGYFTPYQSSYCLDSSLNRTKAKGKVLVCLHAGSSSESK
MEKSIIVKEAGGVGMILIDEADKGVAIPFVIPAATVGKRIGNKILAYINNTRLPMARILS
AKTVLGAQPAPRVAAFSSRGPNSLTPEILKPDIAAPGLNILAAWSPAASTKLNFNILSGT
SMACPHITGVVALLKAVHPSWSPSAIKSAIMTTAKLSDKHHKPIIVDPEGKRANPFDFGS
GFVNPIKVLDPGLIYDAQPADYKAFLCSIGYDEKSLHLITRDNSTCDQTFASPNGLNYPS
ITVPNLRSTYSVTRTVTNVGKARSIYKAVVFAPMGVNVTVVPRRLAFTKYYQKMNFTVNF
KVAAPTEGYVFGSLTWRNKRTWVTSPLVVRVAHSNMGMMV

Transcript Sequence

Gene sequence data has not been registered.